Bidirectional interactions between circadian rhythms and the gut microbiome

Oct 10, 2025Applied microbiology and biotechnology

Two-way links between daily body clocks and gut bacteria

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Abstract

and microbiota form a bidirectional regulatory feedback loop.

  • Host circadian clocks influence through feeding behavior and immune signaling.
  • Microbial metabolites, such as short-chain fatty acids, can modulate circadian gene expression in the host.
  • Disruptions in circadian alignment are linked to microbial dysbiosis and increased disease susceptibility.
  • Altered microbiota rhythms can impair metabolic control and immune responses in the host.
  • Circadian-microbial misalignment is associated with obesity, type 2 diabetes, and inflammatory bowel disease.
  • strategies, including time-restricted feeding, may help restore circadian-microbial synchrony.

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