Modulation of the lncRNA TCONS_00265853-miR-421-5p-CLOCK axis by Ziyin Buyang Formula in polycystic ovarian syndrome with circadian rhythm disruption: an integrated bioinformatics and experimental approach

📖 Top 20% JournalOct 24, 2025Frontiers in genetics

Ziyin Buyang Formula may affect a gene and microRNA network controlling the body clock in polycystic ovarian syndrome with disrupted daily rhythms

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Abstract

Circadian disruption is associated with exacerbated ovarian apoptosis in a rat model of polycystic ovarian syndrome ().

  • Dysregulation of the and elevation of are linked to increased MAPK activation and ovarian cell death.
  • Twenty-five intersection targets were identified, with MAPK signaling as a central pathway involved in the observed effects.
  • treatment restored levels of TCONS_00265853 and reduced miR-421-5p, leading to suppressed MAPK hyperactivation.
  • Hormonal profiles improved with ZYBYF, indicated by decreased levels of LH, testosterone, and ACTH, alongside increased estrogen and FSH.
  • PRKCA expression, a regulator of MAPK, was rescued by ZYBYF, counteracting the observed dysregulation.

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Key numbers

25
Intersection Genes Identified
Intersection of targets from , , and circadian disruption.
p < 0.001
Hormonal Level Changes
Hormonal profiles were normalized after treatment.
p < 0.001
Ovarian Apoptosis Rate Decrease
treatment decreased the rate of ovarian cell apoptosis.

Key figures

FIGURE 1
Active ingredients of and their related to and circadian disruption
Highlights the 25 shared genes linking ZYBYF targets with PCOS and circadian disruption, spotlighting potential therapeutic targets
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  • Panel A
    Network of active ingredients (blue, red, pink circles) linked to protein targets (green rectangles) showing their relationships
  • Panel B
    Venn diagram displaying overlap of PCOS-related targets from DisGeNET, DrugBank, GeneCards, PharmGkb, and OMIM databases
  • Panel C
    Venn diagram showing 25 intersection genes among ZYBYF targets, PCOS-related genes, and genes
FIGURE 2
Enriched biological processes and pathways for intersection genes in with circadian disruption
Highlights key biological processes and pathways, including MAPK signaling, linked to PCOS and circadian disruption
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  • Panel A
    Top 20 enriched biological process terms with dot size showing gene count and color indicating
  • Panel B
    Top 20 enriched with dot size representing gene count and color representing adjusted p-value
FIGURE 3
Ovarian apoptosis markers and cell death in circadian-disrupted rats treated with
Highlights reduced ovarian cell apoptosis and restored protein balance in circadian-disrupted rats treated with ZYBYF.
fgene-16-1658812-g003
  • Panel A
    images and quantification of apoptosis-related proteins and in ovarian tissues from D/L (control), L/L (model), and ZYBYF groups; BAX protein expression is higher in L/L and reduced in ZYBYF compared to L/L, while Bcl-2 is lower in L/L and increased in ZYBYF.
  • Panel B
    of ovarian tissue showing apoptotic cells (green fluorescence) and nuclei (blue staining) with quantification of apoptosis rate; shows visibly more TUNEL-positive cells than D/L, and ZYBYF group shows fewer apoptotic cells than L/L.
FIGURE 4
mRNA and protein expression related to MAPK signaling in rat ovaries under different treatments
Highlights reduced MAPK pathway activation with treatment, spotlighting its role in restoring ovarian function in PCOS
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  • Panel A
    mRNA levels of Prkca, Il1b, Vegfa, Kdr, Erbb2, and Tgfb1 genes; shows higher expression than D/L, ZYBYF treatment reduces expression compared to L/L
  • Panel B
    Western blots and quantification of phosphorylated p38, ERK1/2, and JNK proteins; L/L group has visibly higher phosphorylation levels than D/L, ZYBYF group shows reduced phosphorylation compared to L/L
FIGURE 5
Relative mRNA levels of , , and in rat ovarian tissue under different conditions
Highlights ’s ability to partially restore disrupted RNA levels in circadian-related ovarian tissue markers
fgene-16-1658812-g005
  • Panel A
    Relative expression of lncRNA TCONS_00265853 mRNA; shows a strong decrease versus D/L, ZYBYF group shows partial recovery versus L/L
  • Panel B
    Relative expression of miR-421-5p mRNA; L/L group shows a strong increase versus D/L, ZYBYF group shows reduced levels versus L/L
  • Panel C
    Relative expression of CLOCK mRNA; L/L group shows a strong decrease versus D/L, ZYBYF group shows partial recovery versus L/L
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Full Text

What this is

  • () affects reproductive-aged women and is linked to circadian rhythm disruptions.
  • This study investigates how the (), a Traditional Chinese Medicine, modulates the --CLOCK axis in .
  • The research combines bioinformatics and experimental approaches to clarify 's therapeutic mechanisms in restoring hormonal balance and ovarian function.

Essence

  • Circadian rhythm disruption exacerbates through the - axis, leading to increased ovarian apoptosis. treatment effectively reverses these effects, restoring hormonal balance and ovarian morphology.

Key takeaways

  • Circadian disruption downregulates and upregulates , increasing MAPK pathway activation and ovarian apoptosis. treatment restores TCONS_00265853 levels and decreases , normalizing the ovarian environment.
  • treatment significantly improves hormonal profiles, with decreased levels of LH, testosterone, and ACTH, and increased estradiol and FSH, indicating its potential to restore reproductive health in .
  • The study identifies the MAPK signaling pathway as a central mechanism in the pathogenesis of , suggesting that targeting this pathway may be a viable therapeutic strategy.

Caveats

  • The study does not establish definitive causality within the TCONS_00265853--CLOCK axis due to the absence of functional perturbation experiments. Further validation is necessary to confirm these mechanistic links.
  • Validation was conducted exclusively in rat models; future research should include human granulosa cells to better understand the molecular mechanisms underlying and 's effects.

Definitions

  • Polycystic Ovary Syndrome (PCOS): A common endocrine disorder in women of reproductive age characterized by hormonal imbalances and ovulatory dysfunction.
  • Ziyin Buyang Formula (ZYBYF): A Traditional Chinese Medicine formulation designed to balance kidney yin and yang, used to treat reproductive health issues.
  • lncRNA TCONS_00265853: A long noncoding RNA implicated in regulating reproductive functions and circadian rhythms.
  • miR-421-5p: A microRNA that targets various genes and is involved in regulating ovarian function.

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