Aging cell

Single-Cell Imaging Shows Differences in Aging Markers and Finds Cell Groups Responding to Rapamycin

Updated

Abstract

Essence

Single-cell imaging showed that senescent human fibroblasts contain distinct biomarker-defined subpopulations, some of which were selectively affected by rapamycin.

Evidence

This cell-based imaging study measured SA-beta-gal, p21, IL-6, and cell and nuclear area in mitomycin C- and D-galactose-induced senescent human fibroblasts, finding marked heterogeneity, a strong link between certain nuclear area subpopulations and IL-6 expression, and selective rapamycin effects on specific subpopulations.

Caveat

The findings come from induced senescence models in human fibroblasts, so their relevance to other cell types, tissues, or in vivo senescence remains uncertain.

Simplified

Key numbers

19×
Increase in -positive cells
Percentage of -positive cells in -treated groups vs. controls
6 to 7×
Increase in nuclear area
Nuclear area increase in -treated cells compared to controls

Key figures

FIGURE 3
Senescence biomarkers in -treated human fibroblasts with synchronized cell cycles
Highlights increased nuclear and cell size with MMC treatment and variable biomarker expression at single-cell level.
ACEL-24-e70209-g005
  • Panel A
    Average total fluorescence intensity of measured across MMC concentrations (0–400 nM); no significant increase except at 100 nM MMC.
  • Panel B
    Average nuclear area increases significantly at 50 nM and above MMC compared to vehicle; no difference among MMC doses.
  • Panel C
    Average cell area increases significantly at 50 nM and above MMC compared to vehicle; no difference among MMC doses.
  • Panel D
    Average nuclear fluorescence intensity increases significantly at 50, 100, and 400 nM MMC compared to vehicle; no difference among MMC doses.
  • Panel E
    Average nuclear fluorescence intensity increases significantly at 50 nM and above MMC compared to vehicle; no difference among MMC doses.
  • Panel F
    Single-cell SA-βgal fluorescence intensity distributions across MMC doses show wide variability with no clear dose-dependent increase.
  • Panel G
    Single-cell nuclear area distributions show increased median area at MMC doses compared to vehicle.
  • Panel H
    Single-cell cell area distributions show increased median area at MMC doses compared to vehicle.
  • Panel I
    Single-cell nuclear p21 fluorescence intensity distributions show variability without clear dose-dependent increase.
  • Panel J
    Single-cell nuclear p16 fluorescence intensity distributions show variability without clear dose-dependent increase.
FIGURE 4
Senescence biomarkers and cell/nuclear size in renal proximal tubule epithelial cells treated with mitomycin C
Highlights increased levels and nuclear enlargement in -treated cells, revealing senescence marker heterogeneity.
ACEL-24-e70209-g006
  • Panel A
    Representative images of stained for Hoechst (blue, nuclei), p21 (red), (green), and cell mask (pink) under vehicle and 50–200 nM MMC treatments; p21 signal appears visibly stronger in MMC-treated cells.
  • Panel B
    Average fold change of nuclear p21 fluorescence showing significant increase at 100 and 200 nM MMC compared to vehicle.
  • Panel C
    Average fold change of nuclear p16 fluorescence showing significant increase at 200 nM MMC compared to vehicle.
  • Panel D
    Average fold change of activity with significant increases at 50, 100, and 200 nM MMC compared to vehicle.
  • Panel E
    Average fold change of γ-H2AX fluorescence showing significant increase at 100 nM MMC compared to vehicle.
  • Panel F
    Nuclear area measurements showing significant enlargement at 50, 100, and 200 nM MMC compared to vehicle.
  • Panel G
    Cell area measurements showing a significant increase only at 50 nM MMC compared to vehicle.
  • Panels H–L
    Single-cell data distributions for nuclear p21, nuclear p16, SA-βgal, nuclear area, and cell area across vehicle and MMC treatments; nuclear p21 and SA-βgal appear to have wider distributions at higher MMC doses.
FIGURE 6
Senescence biomarkers in -treated human fibroblasts with and without rapamycin.
Highlights reduced senescence marker intensity and nuclear size in rapamycin-treated cells versus MMC alone.
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  • Panel A
    Average total fluorescence intensity of in ; MMC group appears higher than MMC plus rapamycin.
  • Panel B
    Average nuclear area (µm²) in HDFs; MMC group shows visibly larger nuclear area than MMC plus rapamycin.
  • Panel C
    Average total fluorescence intensity of in HDFs; MMC group appears higher than MMC plus rapamycin.
  • Panels D–F
    Sub-population distributions of SA-βgal enzyme activity (D), nuclear area (E), and p21 total intensity (F) in HDFs treated with MMC or MMC plus rapamycin.
  • Panels G–I
    Percentage of cells above induction thresholds for SA-βgal (G), nuclear area (H), and p21 (I); MMC group shows higher percentages than MMC plus rapamycin.
FIGURE 1
Vehicle vs -treated human fibroblasts: senescence marker and cell proliferation levels
Highlights increased SA-βgal intensity and reduced proliferation in MMC-treated cells, revealing senescence heterogeneity.
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  • Panel A
    Representative images of nuclei (blue), SA-βgal (red), and EDU (green) in treated with vehicle or 200 nM MMC; MMC-treated cells visibly show more red SA-βgal staining and fewer green EDU-positive cells.
  • Panel B
    Average SA-βgal fluorescence intensity increases with MMC concentration (50–600 nM) compared to vehicle control.
  • Panel C
    Percentage of EDU-positive cells (indicating proliferation) is significantly reduced in 200 nM MMC-treated HDFs versus control.
  • Panel D
    Time course shows stable cell proliferation in control but no increase in proliferation in 200 nM MMC-treated cells over 18 days.
  • Panel E
    Single-cell SA-βgal fluorescence intensities show increased spread and higher values in MMC-treated cells compared to vehicle.
  • Panel F
    Radar chart displays distribution of SA-βgal fluorescence intensities across MMC concentrations, with control cells having higher values at 0 nM.
  • Panel G
    Sub-population analysis shows MMC-treated cells (red) have more cells with higher SA-βgal intensity bins than vehicle (black).
  • Panel H
    Percentage of cells with SA-βgal intensity above control threshold is significantly higher in MMC-treated groups (50–600 nM).
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Full Text

What this is

  • This research investigates cellular senescence, a state of irreversible growth arrest linked to ageing and stress.
  • Using single-cell fluorescence imaging, the study examines various senescence biomarkers in human fibroblasts.
  • Key findings reveal significant heterogeneity in biomarker expression and identify specific sub-populations responsive to rapamycin treatment.

Essence

  • This study identifies substantial variability in senescence biomarkers among human fibroblasts, revealing distinct sub-populations that respond to rapamycin. The findings emphasize the importance of assessing cellular heterogeneity in senescence research.

Key takeaways

  • Significant heterogeneity in SA-βgal activity was observed among MMC-treated human fibroblasts. The study found a 19-fold increase in the percentage of SA-βgal-positive cells in treated groups compared to controls.
  • Nuclear area measurements emerged as reliable indicators of senescence. A consistent 6- to 7-fold increase in nuclear area was observed in MMC-treated cells compared to controls.
  • Rapamycin selectively reduced senescence biomarkers in specific sub-populations. This highlights the potential of targeting heterogeneous senescence markers for therapeutic interventions.

Caveats

  • The study primarily focuses on human fibroblasts, which may limit the generalizability of findings to other cell types. Further validation in diverse cellular contexts is needed.
  • While the induction threshold method improves biomarker assessment, it may still not capture all nuances of senescence heterogeneity.

Definitions

  • Senescence-associated secretory phenotype (SASP): A pro-inflammatory state characterized by the release of cytokines and growth factors by senescent cells.

Simplified

Funding

Competing interests

0 of 9
authors report competing interests
9 report none
PubMed

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