Metagenomics and Machine Learning Identify TMA-Producing Serratia Induced by High-Fat/Choline Diet: A Novel Obesity Target for TMA

Feb 27, 2026Nutrients

High-Fat and Choline Diets May Increase TMA-Producing Serratia Linked to Obesity, Identified by Genetic and Machine Learning Analysis

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Abstract

High-fat diet and high choline significantly interact to increase TMA/TMAO levels in a mouse model.

  • The combination of high-fat diet and choline supplementation exacerbates metabolic disorders.
  • Serratia marcescens was identified as the primary TMA-producing microorganism under high-fat and choline dietary conditions.
  • In vitro cultures showed that Serratia marcescens can convert choline to TMA with a time-dependent efficiency, reaching 60 ± 2.49% after 24 hours.
  • The CutC enzyme from Serratia marcescens exhibits a conserved amino acid sequence and a high affinity for choline.
  • The findings highlight a two-factor synergistic effect of diet on TMA/TMAO production, which could inform strategies for managing metabolic disorders.

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