Functional & integrative genomics

Identifying aging blood vessel cells in stroke using single-cell and bulk gene analysis

Updated

Abstract

A distinct senescence-associated gene signature was identified in endothelial cells related to ischemic stroke, highlighting four key genes.

  • Four key genes—Arhgap31, Tm4sf1, Itm2a, and Vwa1—were closely associated with ischemic stroke pathogenesis.
  • These genes demonstrated differential expression and potential for discrimination in bulk RNA-seq datasets.
  • External validation supported the gene signature, particularly for Arhgap31, Tm4sf1, and Vwa1.
  • In vitro experiments confirmed the differential expression of these genes in senescent endothelial cells.
  • Reduced expression of Arhgap31 was linked to decreased endothelial cell senescence and improved migration and vasculogenesis.
  • Candidate compounds opposing the disease-associated gene signature were predicted for future pharmacological validation.

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