Single-cell and spatial detection of senescent cells using DeepScence

Dec 4, 2023bioRxiv : the preprint server for biology

Detecting aging cells individually and in their tissue location using DeepScence

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Abstract

DeepScence can accurately identify senescent cells in single-cell and spatial transcriptomics data.

  • DeepScence utilizes a deep neural network to pinpoint senescent cells.
  • The method is based on a curated set of senescence-associated genes.
  • It outperforms existing techniques in identifying senescent cells across multiple data collection platforms.
  • Demonstrated effectiveness includes both in vitro and in vivo gene expression data.

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