Single-cell and spatial detection of senescent cells using DeepScence

Oct 8, 2025Cell genomics

Detecting aging cells one by one and in their tissue location using DeepScence

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Abstract

DeepScence can accurately identify senescent cells in single-cell and spatial transcriptomics data.

  • DeepScence utilizes a deep neural network approach to enhance the identification of senescent cells.
  • The method incorporates a curated gene set, CoreScence, which combines information from multiple published sources.
  • DeepScence has shown superior performance compared to existing methods in identifying senescent cells.
  • The accuracy of DeepScence was validated using both in vitro and in vivo single-cell gene expression data.
  • It also effectively analyzes spatial transcriptomics data from various platforms.

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