What this is
- This review discusses the role of the circadian clock in regulating skeletal muscle development in ruminants.
- It emphasizes how external factors like light, temperature, and nutrition influence muscle growth through .
- The paper aims to provide insights for improving meat production efficiency by managing these factors.
Essence
- critically regulate skeletal muscle satellite cell (SMSC) behavior in ruminants, affecting muscle growth and meat production. Environmental factors such as light and temperature can disrupt these rhythms, leading to impaired muscle development.
Key takeaways
- More than 2,300 genes in skeletal muscle exhibit circadian rhythmicity, influencing myogenesis and metabolism. Disruption of these rhythms can negatively impact SMSC proliferation and differentiation.
- Heat stress affects approximately 80% of cattle annually, disrupting and impairing muscle development. This underscores the need for effective thermal management in ruminant farming.
- The review suggests that understanding the interactions between the circadian clock and external factors can lead to better management strategies for enhancing meat production in ruminants.
Caveats
- Current knowledge largely relies on static models, limiting insights into the dynamic nature of circadian regulation in muscle development.
- Interactions between multiple environmental factors and their cumulative effects on the circadian clock and muscle growth are still underexplored.
Definitions
- circadian rhythms: Endogenous oscillations with a period of approximately 24 hours that help organisms adapt to daily environmental changes.
- skeletal muscle satellite cells (SMSCs): Progenitor cells responsible for muscle repair and growth, regulated by various signaling pathways.
AI simplified
Introduction
Ruminant meat is one of the fastest-growing segments of the global meat market, owing to its high nutritional quality and health benefits. According to the Food and Agriculture Organization, the global populations of cattle, sheep, and goats reached 1.58, 1.32, and 1.13 billion, respectively, in 2023. By 2050, the cattle population is projected to reach 2.6 billion, whereas the combined sheep and goat population is expected to reach 2.7 billion [1]. This expansion underscores the importance of ruminants in the global meat supply. However, ruminant production is more environmentally impactful than non-ruminant production, and its expansion challenges efforts to achieve carbon emission targets [2]. Increasing temperatures, recurrent droughts, and erratic rainfall are increasingly disrupting traditional grazing systems and undermining farm profitability [1]. To address these issues, producers must adopt precision livestock technologies and integrate molecular targeted interventions to increase meat yield [3]. Such integrated approaches are essential for increasing the efficiency and sustainability of ruminant production and for maintaining a stable market supply.
As the largest muscle tissue in ruminants, skeletal muscle development is coordinately regulated by polygenic and nutritional factors that directly influence meat yield and quality [4]. Skeletal muscle originates from myogenic progenitor cells within the embryonic dermomyotome of somites [5]. The proliferation and myogenic differentiation of these cells, which are hierarchically controlled by paired box (PAX) transcription factors, such as Pax3 and Pax7, determine muscle developmental fate [6]. During embryogenesis, PAX3-positive progenitors, stimulated by Wnt and Sonic hedgehog signaling from the notochord, initiate the expression of myogenic regulatory factors (MRFs), including myogenic factor 5 (Myf5) and myogenic determining factor (MyoD), leading to the formation of primary myofibers [6, 7]. In the late fetal stages, a subset of PAX7-positive cells migrates to the periphery of myofibers, establishing the skeletal muscle satellite cell (SMSC) reservoir [8]. After birth, most SMSCs remain quiescent in the G0 phase [9]. Upon activation by muscle injury or growth signals, SMSCs re-enter the cell cycle via multilevel regulatory mechanisms involving Notch signaling, histone modifications, and miRNAs [10ā12]. This activation is marked by Pax7 downregulation, and MyoD and Myf5 upregulation, which drive myoblast differentiation [13]. Subsequent myogenic differentiation involves sequential activation of MyoD and myogenin (MyoG), which is coordinated by Wnt/β-catenin signaling, m6A RNA methylation, and non-coding RNA networks, which collectively promote myotube formation and myofiber maturation [14ā16]. Although the key molecular mechanisms involved in SMSC proliferation and differentiation are known, current knowledge relies heavily on static single-time-point models, limiting insight into spatiotemporal dynamics and the development of precise adaptive strategies for improving meat production efficiency in ruminants.
More than 2,300 protein-coding genes in skeletal muscles exhibit circadian rhythmicity, many of which are involved in myogenesis, muscle repair, and energy metabolism [17]. However, mismanagement of lighting, feeding, exercise, or other husbandry factors can desynchronize the central clock in the suprachiasmatic nucleus (SCN) from peripheral muscle clocks, impairing skeletal muscle growth and development [18]. Key myogenic regulators involved in proliferation (Pax7, MyoD, and Myf5) and differentiation (MyoD and MyoG) are circadian clock-controlled genes (CCGs), indicating that the circadian clock temporally regulates SMSC fate over 24 h cycles [19]. This review examines how the circadian clock governs SMSC behavior and explores the roles of environmental factors, feeding rhythms, gut microbiota, and physical activity in modulating the muscle circadian system. This study aimed to provide a theoretical foundation and practical insights to support precise health management and enhance the meat productivity of ruminants.
Circadian clock machinery
Master circadian clock

Molecular mechanisms of the circadian clock.Circadian clock feedback loop regulatory network.Core loop.Secondary loop.Third loop. BMAL1, brain and muscle ARNT-like protein 1; CCG, clock-controlled gene; CKIε, casein kinase I epsilon; CLOCK, circadian locomotor output cycles kaput; CRY, cryptochrome; D-box, D-site binding element; DBP, D-site binding protein; E-box, enhance-box; E4BP4, E4-binding protein 4; PER, period; REV-ERB, reverse erb; ROR, retinoic acid receptor-related orphan receptor; RORE, ROR response element a b c d
Peripheral clocks
The core circadian clock components are expressed and functionally active in peripheral tissues, such as the intestine, liver, and skeletal muscle, where their molecular mechanisms remain highly conserved [26ā28]. The lightādark cycle acts as the principal zeitgeber (ZT), synchronizing the central clock in the SCN via photic input through the retina. This central timing signal is then transmitted to peripheral tissues via neural, hormonal, and behavioral pathways, establishing a system-wide circadian network [29, 30]. Importantly, peripheral clocks are entrained by non-photic cues, including feeding-fasting cycles, temperature variations, and physical activity [29]. Desynchronization between the central and peripheral clocks can disrupt metabolic homeostasis, immune function, and tissue development and is linked to pathologies in skeletal muscle, including muscle atrophy, sarcopenia, and muscular dystrophy, underscoring the importance of rhythmicity in muscle maintenance and function [31, 32].
The molecular clock in SMSC
Regulation of SMSC proliferation

Skeletal muscle development and circadian clock regulation.Mechanisms orchestrating SMSC formation in the embryo.Proliferation and myogenic differentiation of SMSCs during the growth period.Circadian clock regulation of SMSC proliferation.Circadian clock regulation of SMSC differentiation. BMAL1, brain and muscle ARNT-like protein 1; CLOCK, circadian locomotor output cycles kaput; CRY, cryptochrome; E-box, enhance-box; IGF-2, insulin-like growth factor 2; MRF4, myogenic regulatory factor 4; MYF5, myogenic factor 5; MYHC, myosin heavy chain; MYOD, myogenic determining factor; MYOG, myogenin; PAX3, paired box 3; PAX7, paired box 7; PER, period; REV-ERBα, reverse erb alpha; RORα, retinoic acid receptor-related orphan receptor α; SMSC, skeletal muscle satellite cell; Shh, sonic hedgehog; Wnt, wingless-type MMTV integration site family a b c d
Regulation of myogenic differentiation
The shift from SMSC proliferation to differentiation is characterized by the downregulation of Pax7 and sustained upregulation of MyoD [14]. MYOD activates MYOG and myogenic regulatory factor 4 (MRF4) to initiate myotube formation [14]. Ultimately, MYOD and MYOG cooperate to induce terminal differentiation markers, including Mrf4 and myosin heavy chain (MyHC), thereby driving the assembly of multinucleated myofibers [44, 45]. BMAL1 is a key regulator of this process, enhancing myogenic differentiation by directly upregulating Myf5 and MyoD; modulating Wnt pathway components such as Dishevelled 2, β-catenin, and transcription factor 3; and amplifying WntāMRF synergy [46, 47]. Non-ruminant animal models and empirical evidence in goats show that BMAL1-driven transcription of miR-27b suppresses PAX3, thereby inhibiting SMSC proliferation [48, 49]. CLOCK:BMAL1-activated MYOD binds to E-box elements in the Tcap promoter, reinforcing differentiation [50]. Although CLOCK:BMAL1 regulates miR-455, which targets Clock mRNA, the functional relevance of this feedback mechanism in myogenesis remains unclear [51]. PER1/2 supports myoblast differentiation by binding to the enhancer-promoter regions of insulin-like growth factor 2 (IGF-2), thereby increasing Igf2 expression and MyoG [38]. CRY2 facilitates differentiation and cell fusion by regulating cyclin D1 and Tmem176b, thereby preventing premature cell cycle exit and maintaining MyoG levels [52]. In contrast, REV-ERBα acts as a negative regulator; its deletion upregulates Myf5, MyoD, MyoG, and Wnt3a, accelerating myotube formation (Fig. 2d) [42]. Several non-coding RNAs influence the fate of SMSCs through specific molecular mechanisms. For example, lncMD1 competitively binds to miR-133a-3p and miR-361-3p, thereby relieving the repression of the target genes DCTN1/DCTN2, inhibiting proliferation, and promoting differentiation [53]. However, whether the circadian clock modulates SMSCs through non-coding RNA networks remains predominantly unknown. In summary, the core circadian clock negative feedback loop promotes skeletal muscle growth and development by directly or indirectly regulating myogenic differentiation and cell fusion, providing a molecular basis for enhanced meat production.
Current evidence in ruminants vs. knowledge gaps
| Clock gene | Non-ruminant models | Ruminant models | References | ||||
|---|---|---|---|---|---|---|---|
| Species | Tissue/Cell | Phenotype | Species | Tissue/Cell | Phenotype | ||
| /BMAL1CLOCK | Mouse;Ā Human | SMSCs | Drives E-box-mediated transcription ofto promote muscle growthMyoD | Goat;Ā Sheep | Skeletal muscle | Governs skeletal muscle development in fetuses and juveniles; however, the precise mechanism remains unknown | [,,,] [37] [55] [56] [59] |
| /PERCRY | Mouse | SMSCs;Ā Myoblasts | Inhibits CLOCK:BMAL1-mediated transcriptional activation of, thereby suppressing proliferation;andactivateto promote myoblast differentiationMyoDPerCry2MyoG | Cattle | Skeletal muscle | is associated with carcass traits; however, the molecular mechanism remains unknownCRY | [,,,] [38] [52] [57] [58] |
| /REV-ERBαRORα | Mouse; Human | Myoblasts; Skeletal muscle | inhibits MRF expression to suppress myogenesis;promotes BMAL1-mediated transcriptional activation ofto facilitate myogenesisRev-erbαRORαMyoD | Yak; Goat | SMSCs; Ear tissue | inhibits MRF expression to suppress myogenesis;is associated with growth traits; however, the molecular mechanism remains unknownREV-ERBαRORα | [,,,,] [41] [42] [54] [60] [61] |
Environmental factors affecting the circadian rhythm of SMSCs
Photoperiod

The circadian clock mediates the regulation of skeletal muscle by light and thermal stress. AR, adrenergic receptor; BMAL1, brain and muscle ARNT-like protein 1; cAMP, cyclic adenosine monophosphate; CK2, casein kinase 2; CLOCK, circadian locomotor output cycles kaput; CRE, cAMP response element; CREB, cAMP-response element binding protein; EZH2, enhancer of zeste homolog 2; GC, glucocorticoid; GR, glucocorticoid receptor; HSE, heat shock response element; HSF1, heat shock factor 1; LRP6, low density lipoprotein receptor-related protein 6; MYOD, myogenic determining factor; PACAP, pituitary adenylate cyclase activating polypeptide; PER, period; PKA, protein kinase A; REV-ERBα, reverse erb alpha; RORE, ROR response element; ROS, reactive oxygen species; WNT5A, wingless-type MMTV integration site family member 5A
Thermal environment
Heat stress considerably hinders global meat production, affecting approximately 80% of cattle annually, with > 80% of goats and nearly 60% of sheep reared in hot, arid zones [74, 75]. As a significant ZT, high temperatures can disrupt circadian rhythms, compromising meat production [76]. Mechanistically, heat stress activates heat shock factor 1 (HSF1), which binds to heat shock response elements near the E-box sequences in the Per2 promoter, potentially desynchronizing the central and peripheral clocks [77, 78]. This dysregulation may inhibit SMSC proliferation and differentiation via CCGs, consistent with the heat-induced downregulation of PAX7, MYOD, MYF5, MYOG, and MYHC in ovine myoblasts [79]. Heat stress causes direct clock interference and induces reactive oxygen species accumulation, which promotes BMAL1 phosphorylation via casein kinase 2 and disrupts the EZH2āCLOCK/BMAL1 interaction, collectively suppressing MYOD activity and myoblast differentiation [80ā82]. Antioxidants, such as resveratrol and vitamin A, mitigate these effects and improve SMSC viability and production performance [83ā86]. Cold stress may also impair SMSC function through circadian pathways, potentially via HSF1-PER2-mediated MyoD suppression or peroxisome proliferator activated receptor γ coactivator-1α (PGC-1α)-mediated Rev-erbα upregulation, which dampens MyoD rhythmicity [87ā92]. Notably, heat/cold stress disrupts the circadian oscillation of body temperature in mammals, with lamb studies documenting fluctuations reaching 4 °C [93, 94]. In vitro studies employing square-wave temperature cycles to simulate circadian oscillations in body temperature have demonstrated that such thermal fluctuations can reset the circadian clock in myocytes [95]. However, whether extreme climatic conditions affect meat production in ruminants by modulating the circadian clock remains largely unknown. In summary, extreme climatic conditions may disrupt core body temperature and circadian clock oscillations, impair SMSC proliferation and differentiation, and reduce meat production in ruminants. These findings underscore the importance of precisely controlling the thermoneutral environment in ruminant husbandry.
Nutrition and exercise interfere with the circadian rhythm of SMSCs
Chrononutrition and feeding time

The circadian clock orchestrates nutrient responses in skeletal muscle. Akt, protein kinase B; AMPK, adenosine monophosphate-activated protein kinase; BMAL1, brain and muscle ARNT-like protein 1; CLOCK, circadian locomotor output cycles kaput; mTOR, mammalian target of rapamycin; MYOD, myogenic determining factor; PER, period; PGC-1α, peroxisome proliferator activated receptor γ coactivator-1α; PI3K, phosphatidylinositol 3-kinase; PPARα, peroxisome proliferator activated receptor α; SIRT1, silent information regulator 1; S6K1, ribosomal protein S6 kinase beta-1
The gut microbeāskeletal muscle axis

Rumen microbiota regulates skeletal muscle through the circadian clock. Akt, protein kinase B; AMPK, adenosine monophosphate-activated protein kinase; BA, bile acids; BMAL1, brain and muscle ARNT-like protein 1; cAMP, cyclic adenosine monophosphate; CLOCK, circadian locomotor output cycles kaput; CREB, cAMP-response element binding protein; CRY, cryptochrome; FFAR2/3, free fatty acid receptor 2/3; FGF-19, fibroblast growth factor 19; FXR, farnesoid X receptor; HDACs, histone deacetylases; IGF-1, insulin-like growth factor 1; LPS, lipopolysaccharide; MEF2, myocyte enhancer factor 2; mTOR, mammalian target of rapamycin; MyD88, myeloid differentiation primary response 88; MYOD, myogenic determining factor; MYOG, myogenin; NF-kB, nuclear factor kappa-B; PER, period; PGC-1α, peroxisome proliferator activated receptor γ coactivator-1α; PI3K, phosphatidylinositol 3-kinase; PKA, protein kinase A; REV-ERBα, reverse erb alpha; SCFAs, short-chain fatty acids; TAK1, transforming growth factor-β-activated kinase 1; TLR4, Toll-like receptor 4; 5-HT, 5-hydroxytryptamine
Chronoexercise

Exercise regulates skeletal muscle through circadian clock-dependent mechanisms. BMAL1, brain and muscle ARNT-like protein 1; cAMP, cyclic adenosine monophosphate; CCGS, clock-controlled genes; CLOCK, circadian locomotor output cycles kaput; CRE, cAMP response element; CREB, cAMP-response element binding protein; HIF-1α, hypoxia-inducible factor 1-alpha; HRE, hypoxia response element; MYF5, myogenic factor 5; MYOD, myogenic determining factor; PER, period; PGC-1α, peroxisome proliferator activated receptor γ coactivator-1α; PHD, prolyl hydroxylase domain; PKA, protein kinase A; RORE, ROR response element; RORα, retinoic acid receptor-related orphan receptor α; SIRT1, silent information regulator 1
Conclusion
The circadian clock precisely regulates SMSC proliferation and differentiation in ruminants and is influenced by photoperiod, temperature, feeding patterns, gut microbiota, and exercise. Although multifactorial interactions remain understudied, these factors form interconnected networks. The gut microbiota mediates host rhythms and muscle development and responds to environmental and dietary cues, necessitating a deeper mechanistic insight. Elucidating clockāSMSC interactions will refine management and nutritional strategies, support muscle growth, and facilitate precision health farming. Future studies should dissect external factorāclockāmuscle interactions to sustainably enhance meat production.